1.Research problem

Accurate segmentation and labeling of spinal structures are essential for diagnosing and managing spinal pathologies.

2.Contribution

  • Cascaded nnU-Net models with landmark-guided iterative labeling.
  • Segments vertebrae, intervertebral discs, spinal cord and spinal canal across MRI contrasts.

3.Architecture, methodology & evidence status

Evidence & statusThis is a preprint hosted on ResearchGate (preprint) · associated conference material and has not undergone peer review. It is an independent research contribution; its claims and any reported experiments should be read as such.

The abstract above is the authoritative summary of the work as posted at the official source. This archival record does not add results, figures or claims beyond those in the published/​posted manuscript. For the complete methodology, results and references, consult the official record.

4.Related research

Part of the series Clinical AI and Multiple Sclerosis Research.

5.How to cite

Choose a format below. BibTeX and RIS files are also downloadable directly.

Warszawer, Y., Molinier, N., Valošek, J., Benveniste, P., Bédard, S., Shirbint, E., Mohamed, F. B., Tsagkas, C., Kolind, S., Lynd, L., Oh, J., Prat, A., Tam, R., Traboulsee, A., Patten, S., Lee, L. E., Achiron, A., & Cohen-Adad, J. (2025). TotalSpineSeg: Robust Spine Segmentation with Landmark-Based Labeling in MRI. ResearchGate (preprint) · associated conference material. https://doi.org/10.13140/RG.2.2.31318.56649

Yehuda Warszawer, Nathan Molinier, Jan Valošek, Pierre-Louis Benveniste, Sandrine Bédard, Emanuel Shirbint, Feroze B. Mohamed, et al. 2025. “TotalSpineSeg: Robust Spine Segmentation with Landmark-Based Labeling in MRI.” ResearchGate (preprint) · associated conference material. https://doi.org/10.13140/RG.2.2.31318.56649.

@misc{shirbint2025totalspineseg,
  title = {TotalSpineSeg: Robust Spine Segmentation with Landmark-Based Labeling in MRI},
  author = {Yehuda Warszawer and Nathan Molinier and Jan Valosek and Pierre-Louis Benveniste and Sandrine Bedard and Emanuel Shirbint and Feroze B. Mohamed and Charidimos Tsagkas and Shannon Kolind and Larry Lynd and Jiwon Oh and Alexandre Prat and Roger Tam and Anthony Traboulsee and Scott Patten and Lisa Eunyoung Lee and Anat Achiron and Julien Cohen-Adad},
  year = {2025},
  doi = {10.13140/RG.2.2.31318.56649},
  url = {https://doi.org/10.13140/RG.2.2.31318.56649},
  note = {Preprint; associated conference work is not a journal peer-review record}
}
TY  - PREPRINT
AU  - Yehuda Warszawer
AU  - Nathan Molinier
AU  - Jan Valosek
AU  - Pierre-Louis Benveniste
AU  - Sandrine Bedard
AU  - Emanuel Shirbint
AU  - Feroze B. Mohamed
AU  - Charidimos Tsagkas
AU  - Shannon Kolind
AU  - Larry Lynd
AU  - Jiwon Oh
AU  - Alexandre Prat
AU  - Roger Tam
AU  - Anthony Traboulsee
AU  - Scott Patten
AU  - Lisa Eunyoung Lee
AU  - Anat Achiron
AU  - Julien Cohen-Adad
TI  - TotalSpineSeg: Robust Spine Segmentation with Landmark-Based Labeling in MRI
PY  - 2025
DO  - 10.13140/RG.2.2.31318.56649
UR  - https://doi.org/10.13140/RG.2.2.31318.56649
N1  - Preprint; associated conference work is not a journal peer-review record
ER  -

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